SubtiBank SubtiBank
Version comparison:

2017-8-11 16:0:3Mon May 16 2016 16:20:52 GMT+0200 (CEST)

proteinLength

518

geneLength

1554

Gene

Coordinates

2,892,138 → 2,893,694

The protein

Catalyzed reaction/ biological activity

Acetyl-CoA + 3-methyl-2-oxobutanoate + H2O = (2S)-2-isopropylmalate + CoA (according to Swiss-Prot)

Acetyl-CoA 3-methyl-2-oxobutanoate H2O = (2S)-2-isopropylmalate CoA (according to Swiss-Prot)

The protein

Additional information

subject to Clp-dependent proteolysis upon glucose starvation [PubMed|17981983]

belongs to the 100 [SW|most abundant proteins] [PubMed|15378759]

:

subject to Clp-dependent proteolysis upon glucose starvation [http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Abstract&list_uids=17981983 PubMed]

Expression and Regulation

Operons

[[this]]

Expression and Regulation

Other regulations

[[this]]

[SW|Categories] containing this gene/protein

[SW|biosynthesis/ acquisition of amino acids], [SW|membrane proteins], [SW|most abundant proteins]

Gene

Coordinates on the chromosome (coding sequence)

2,892,138 -> 2,893,694

Expression and Regulation

Operon

''[[protein|ilvB]]-[[protein|ilvH]]-[[protein|ilvC]]-[[protein|leuA]]-[[protein|leuB]]-[[protein|leuC]]-[[protein|leuD]]'' [Pubmed|1577690]

Expression and Regulation

[SW|Sigma factor]

[[protein|SigA]] [Pubmed|1577690]

Expression and Regulation

Regulation

for a complete overview on the regulation of the ilv operon, see [http://www.ncbi.nlm.nih.gov/pubmed/20935095 Brinsmade ''et al''.]

repressed by casamino acids [Pubmed|12107147]

expression is stimulated in the presence of glucose [Pubmed|12193635]

repressed in the absence of good nitrogen sources (glutamine or ammonium) ([[protein|TnrA]]) [Pubmed|15547269]

repressed during growth in the presence of branched chain amino acids ([[protein|CodY]], [[protein|T-box]]) [Pubmed|12618455]

Expression and Regulation

Regulatory mechanism

[[protein|CodY]]: transcription repression [Pubmed|12618455]

[[protein|CcpA]]: transcription activation [Pubmed|12193635]

[[protein|T-box]]: tRNA-controlled [SW|RNA switch] that mediates termination/antitermination

[[protein|TnrA]]: transcription repression [Pubmed|15547269]

Expression and Regulation

Additional information

subject to Clp-dependent proteolysis upon glucose starvation [http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Abstract&list_uids=17981983 PubMed]

An [[ncRNA|antisense RNA]] is predicted for'[[protein|leuA]]' [PubMed|20525796]

belongs to the 100 [SW|most abundant proteins] [PubMed|15378759]